Rat rna-seq

Author: jfqx

August undefined, 2024

TīmeklisOur RNA-seq data suggest further increases of many existing upregulated immune responses in chronic constrictive injury rats after repetitive spinal cord stimulation, … Tīmeklis2024. gada 6. okt. · Methods: Single-cell RNA sequencing was performed on the lungs of monocrotaline (MCT), Sugen-hypoxia (SuHx), and control rats to identify altered genes and cell types, followed by validation using flow-sorted cells, RNA in situ hybridization, and immunofluorescence. Relevance to human PAH was assessed by …

Transcriptional investigation of the toxic mechanisms of ... - PubMed

Tīmeklis2024. gada 1. nov. · Secondly, RNA-Seq in the ileum of rats was applied and prioritized to analyze several genes reversed by XBXT that might play an important role in the molecular mechanism involved in the antiemetic function of XBXT. Finally, 20 genes reflected on inflammation-related pathways were randomly selected for verification … Tīmeklis2024. gada 16. aug. · To explore the underlying mechanism of EA precondition-induced ischemic tolerance, we used RNA-Seq to generate gene expression profiles in the brains of EA-pretreated rats. The results showed that acupuncture precondition could significantly regulate 217 gene expressions in a healthy rat brain. ekspres saeco gran aroma sm6580/20

RNA-seq: Fundamentos, aplicaciones y Protocolo - Chad Wilken

Tīmeklis2024. gada 12. dec. · A comprehensive RNA-Seq data set was constructed using 320 RNA samples isolated from 10 organs of Fischer 344 rats to identify and validate … Tīmeklis2024. gada 9. nov. · Using RNA-seq, downregulation of glutamyl aminopeptidase (Enpep) mRNA and upregulation of G protein subunit gamma 5 (Gng5) mRNA were shown in S2 B a compared with SS rats uniquely under NSD (Figure 5A and Figure S14 in the Data Supplement). TīmeklisRNA-seq technology enables an unbiased and in-depth analysis of the genome and transcriptome . Studies based on RNA-seq have revealed the complexity of the … teamprodukte

Sci-Hub A rat RNA-Seq transcriptomic BodyMap across 11 …

Concordance between Thioacetamide-Induced Liver Injury in Rat …

Tīmeklis2024. gada 5. sept. · High-throughput RNA sequencing (RNA-Seq) revealed the presence of differentially expressed genes (DEGs) in subcortical structures of rat … Tīmeklis2024. gada 15. janv. · We constructed a comprehensive RNA-Seq data set for studying the dynamics of the rat transcriptome using 320 RNA samples … teamprolookTīmeklis2024. gada 21. febr. · To obtain further information on rat PGCs at each developmental stage, we purified PGCs at various stages and used RNA sequencing (RNA-seq) to investigate changes to the transcriptome during development. We collected H2BVenus + cells at E9.5 (early PGCs), E10.5 and E11.5 (migratory PGCs), and E12.5 and E15.5 … ekspres saeco granaroma sm6580/20 instrukcja

"TīmeklisThe rat has been used extensively as a model for evaluating chemical toxicities and for understanding drug mechanisms. However, its transcriptome across multiple … " - Rat rna-seq

Rat rna-seq

RNA-seq of spinal cord from nerve-injured rats after spinal cord ...

Tīmeklis2012. gada 17. febr. · Currently, RNA-Seq Atlas holds gene expression profiles on eleven human, healthy tissues and can be accessed over an intuitive web interface. To further increase the utility of the RNA-Seq Atlas, the data were linked to multiple microarray gene profiles representing normal and pathological states. Furthermore, … Tīmeklis2024. gada 25. marts · Here we present single-cell RNA sequencing data from10,983 adult rat testicular cells after the rats were treated with …

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Tīmeklis2024. gada 27. sept. · El RNA-seq puede decirnos qué genes se activan en una célula, Cuál es su nivel de expresión y en qué momentos se activan o apagan2. Esto permite a los científicos comprender más profundamente la biología de una célula y evaluar los cambios que pueden indicar enfermedad., Algunas de las técnicas más populares … TīmeklisHere, we sought to explore whether RNA-seq data obtained from human cells (in vitro) treated with thioacetamide-S-oxide (a toxic intermediate metabolite) would correlate across species with the injury responses found in rat cells (in vitro) after exposure to this metabolite as well as in rats exposed to thioacetamide (in vivo).

TīmeklisUniversal human, mouse and rat reference total RNA (1 µg) was depleted of rRNA using the NEBNext rRNA Depletion Kit v2 (Human/Mouse/Rat). RNA-seq libraries were prepared from untreated and depleted RNA using the NEBNext Ultra II Directional RNA Library Prep Kit for Illumina followed by paired-end sequencing (2 x 75bp). 10 … TīmeklisAbout Seurat. Seurat is an R package designed for QC, analysis, and exploration of single-cell RNA-seq data. Seurat aims to enable users to identify and interpret sources of heterogeneity from single-cell transcriptomic measurements, and to integrate diverse types of single-cell data. If you use Seurat in your research, please considering ...

Tīmeklis2024. gada 4. sept. · The rat is an important model organism in biomedical research for studying human disease mechanisms and treatments, but its annotated … TīmeklisTruSeq Stranded Total RNA Human/Mouse/Rat removes cytoplasmic rRNA. TruSeq Stranded Total RNA Gold removes both cytoplasmic and mitochondrial rRNA. The total RNA kits are also compatible with the new unique dual (UD) index kits, IDT for Illumina - TruSeq RNA UD Indexes, which allows multiplexing of up to 96 samples.

Tīmeklis2024. gada 12. dec. · RNA-Seq is a powerful quantitative tool to explore genome wide expression. The aim of this study is to provide a comprehensive RNA-Seq …

Tīmeklis2024. gada 15. apr. · Methods: Single-cell RNA sequencing was performed on the lungs of monocrotaline (MCT), Sugen-hypoxia (SuHx), and control rats to identify altered genes and cell types, followed by validation using flow-sorted cells, RNA in situ hybridization, and immunofluorescence. Relevance to human PAH was assessed by … ekspres saeco granaroma sm6585/00 ceneoTīmeklis2024. gada 7. sept. · The RNA-Seq dataset utilized in this analysis encompassed four developmental stages of rats that are 2-, 6-, 21-, and 108-week olds. Out of the total circ-junctions identified from Segemehl_CIRCexplorer2, we found 10 060 circ-junctions uniquely belonged to 2-week-old stage, 10 852 to 6week-old stage, 10 420 to 21 … ekspres saeco granaroma sm6585/00Tīmeklis2024. gada 6. apr. · RNA-seq (RNA-sequencing) is a technique that can examine the quantity and sequences of RNA in a sample using next-generation sequencing … ekspresija značenjeTīmeklis2024. gada 16. okt. · 1 Introduction. Bioconductor has many packages which support analysis of high-throughput sequence data, including RNA sequencing (RNA-seq). The packages which we will use in this workflow include core packages maintained by the Bioconductor core team for working with gene annotations (gene and transcript … ekspresija genaTīmeklisReduced body weight gain and abnormal ultra-structures in the liver and kidney tissues were spotted in PFOS-exposed rats, indicating successful establishment of the PFOS-exposed rat model. ... The transcriptomic alterations of blood samples upon PFOS exposure were analysed using RNA-Seq. GO analysis indicates that the differentially … ekspresi logika proposisi majemukTīmeklisThe ScriptSeq Complete kits combine powerful Ribo-Zero ribosomal RNA (rRNA) removal technology and the rapid ScriptSeq v2 procedure for seamless, end-to-end … teamprosjekt asTīmeklis2024. gada 5. janv. · Meanwhile, icariin ameliorated HFD and letrozole-induced fatty liver, as evidenced by a reduction in excess triglyceride accumulation, vacuolization, and Oil Red O staining area in the liver of model rats. Results of RNA-sequencing, western blotting, and qRT-PCR analyses indicated that icariin up-regulated fatty acid … ekspresija lica